Transcript: lnc-XKR9-1:6

Basic information

LNCipedia transcript ID: lnc-XKR9-1:6 
LNCipedia gene ID: lnc-XKR9-1
Location (hg19): chr8:71383341-71398160
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2277 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253967.1|MICT00000345667.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.6048 non-coding 
CPAT coding probability 6.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR9-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC120194.1-1:8
5.0 lnc-AC120194.1-1:8
5.1 lnc-SULF1-10:4
5.2 lnc-XKR9-1:6