Transcript: lnc-XKR9-1:8

Basic information

LNCipedia transcript ID: lnc-XKR9-1:8 
LNCipedia gene ID: lnc-XKR9-1
Location (hg19): chr8:71383356-71397892
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2166 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014749; NONHSAT127157
Alternative gene names: XLOC_006833; linc-XKR9-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.5315 non-coding 
CPAT coding probability 0.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR9-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC120194.1-1:1
3.1 lnc-AC120194.1-1:1
4.0 lnc-AC120194.1-1:1
4.1 lnc-AC120194.1-1:1
5.0 lnc-AC120194.1-1:1
5.1 lnc-SULF1-10:6
5.2 lnc-XKR9-1:8