Transcript: lnc-XPC-10:7

Basic information

LNCipedia transcript ID: lnc-XPC-10:7 
LNCipedia gene ID: lnc-XPC-10
Location (hg19): chr3:14565857-14567461
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 624 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000144596.7|FTMT20900035165.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -191.0897 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPC-10:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XPC-5:33
5.0 lnc-XPC-5:33
5.1 lnc-SH3BP5-24:7
5.2 lnc-XPC-10:7