Transcript: lnc-XPC-7:1

Basic information

LNCipedia transcript ID: lnc-XPC-7:1 
LNCipedia gene ID: lnc-XPC-7
Location (hg19): chr3:14182943-14186009
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3067 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000063830.1|FTMT21000000602.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.4186 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPC-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XPC-7:1
5.0 lnc-XPC-7:1
5.1 lnc-SH3BP5-36:1
5.2 lnc-XPC-7:1