Transcript: lnc-XPNPEP1-5:1

Basic information

LNCipedia transcript ID: lnc-XPNPEP1-5:1 
LNCipedia gene ID: lnc-XPNPEP1-5
Location (hg19): chr10:110700727-110701068
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 342 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT016311
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.5741 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPNPEP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPNPEP1-2:1
4.0 lnc-XPNPEP1-2:1
4.1 lnc-XPNPEP1-2:1
5.0 lnc-XPNPEP1-2:1
5.1 lnc-BBIP1-26:1
5.2 lnc-XPNPEP1-5:1