Transcript: lnc-XRCC2-12:3

Basic information

LNCipedia transcript ID: lnc-XRCC2-12:3 
LNCipedia gene ID: lnc-XRCC2-12
Location (hg19): chr7:152455780-152456732
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 953 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000097554.1|FTMT22600008137.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.6616 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XRCC2-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XRCC2-12:3
5.0 lnc-XRCC2-12:3
5.1 lnc-KMT2C-13:3
5.2 lnc-XRCC2-12:3