Transcript: lnc-XXYLT1-4:1

Basic information

LNCipedia transcript ID: lnc-XXYLT1-4:1 
LNCipedia gene ID: lnc-XXYLT1-4
Location (hg19): chr3:195034184-195038026
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 244 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2555_chr3:195034183-195038026_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.8381 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XXYLT1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XXYLT1-4:1
4.0 lnc-XXYLT1-4:1
4.1 lnc-XXYLT1-4:1
5.0 lnc-XXYLT1-4:1
5.1 lnc-PPP1R2-8:1
5.2 lnc-XXYLT1-4:1