Transcript: lnc-YIPF2-3:1

Basic information

LNCipedia transcript ID: lnc-YIPF2-3:1 
LNCipedia gene ID: lnc-YIPF2-3
Location (hg19): chr19:11029846-11031582
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 617 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040286.1|FTMT27300017839.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.3252 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-YIPF2-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-YIPF2-3:1
5.0 lnc-YIPF2-3:1
5.1 lnc-EIF3G-23:1
5.2 lnc-YIPF2-3:1