Transcript: lnc-ZACN-64:2

Basic information

LNCipedia transcript ID: lnc-ZACN-64:2 
LNCipedia gene ID: lnc-ZACN-64
Ensembl Gene ID: ENSG00000267128
Ensembl Transcript ID: ENST00000586627
Location (hg19): chr17:74137597-74149541
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 864 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055988; ENST00000586627.1
Alternative gene names: ENSG00000267128.1; RNF157-AS1; RP11-449J21.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.7448 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZACN-64:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZACN-1:4
4.0 RNF157-AS1:4
4.1 RNF157-AS1:4
5.0 RNF157-AS1:4
5.1 lnc-ZACN-61:2
5.2 lnc-ZACN-64:2