Transcript: lnc-ZBBX-6:2

Basic information

LNCipedia transcript ID: lnc-ZBBX-6:2 
LNCipedia gene ID: lnc-ZBBX-6
Location (hg19): chr3:166896244-166901168
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT093091; FPKM1_group_22364_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.651 non-coding 
CPAT coding probability 46.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZBBX-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBBX-1:2
4.0 lnc-ZBBX-6:2
4.1 lnc-ZBBX-6:2
5.0 lnc-ZBBX-6:2
5.1 lnc-KPNA4-26:2
5.2 lnc-ZBBX-6:2