Transcript: lnc-ZBTB41-1:3

Basic information

LNCipedia transcript ID: lnc-ZBTB41-1:3 
LNCipedia gene ID: lnc-ZBTB41-1
Location (hg19): chr1:197134241-197173181
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2285 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001guz_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.5702 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB41-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASPM-1:1
4.0 lnc-ZBTB41-1:3
4.1 lnc-ZBTB41-1:3
5.0 lnc-ZBTB41-1:3
5.1 lnc-MYOG-85:2
5.2 lnc-ZBTB41-1:3