Transcript: lnc-ZBTB7C-4:1

Basic information

LNCipedia transcript ID: lnc-ZBTB7C-4:1 
LNCipedia gene ID: lnc-ZBTB7C-4
Location (hg19): chr18:45404666-45408815
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 282 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT059176; ENST00000599498.1
Alternative gene names: ENSG00000269365.1; RP11-380M21.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.1816 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB7C-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB7C-4:1
4.0 lnc-ZBTB7C-4:1
4.1 lnc-ZBTB7C-4:1
5.0 lnc-ZBTB7C-4:1
5.1 lnc-DYM-24:1
5.2 lnc-ZBTB7C-4:1