Transcript: lnc-ZC3H12B-20:5

Basic information

LNCipedia transcript ID: lnc-ZC3H12B-20:5 
LNCipedia gene ID: lnc-ZC3H12B-20
Location (hg19): chrX:63425854-63525873
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 598 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000111430.1|HBMT00001535226.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.5984 non-coding 
CPAT coding probability 8.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZC3H12B-20:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZC3H12B-20:5
5.0 lnc-ZC3H12B-20:5
5.1 lnc-CXorf49B-71:5
5.2 lnc-ZC3H12B-20:5