Transcript: lnc-ZC3H12C-5:4

Basic information

LNCipedia transcript ID: lnc-ZC3H12C-5:4 
LNCipedia gene ID: lnc-ZC3H12C-5
Location (hg19): chr11:109930701-109932233
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 396 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000003787.1|FTMT24300027868.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -186.8176 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZC3H12C-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZC3H12C-5:4
5.0 lnc-ZC3H12C-5:4
5.1 lnc-ZC3H12C-5:4
5.2 lnc-ZC3H12C-5:4