Transcript: lnc-ZC3H12D-2:5

Basic information

LNCipedia transcript ID: lnc-ZC3H12D-2:5 
LNCipedia gene ID: lnc-ZC3H12D-2
Location (hg19): chr6:149341892-149353750
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3904 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236591.1|ENCT00000392466.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.5384 non-coding 
CPAT coding probability 6.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZC3H12D-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZC3H12D-2:5
5.0 lnc-ZC3H12D-2:5
5.1 lnc-RAET1G-21:2
5.2 lnc-ZC3H12D-2:5