Transcript: lnc-ZCWPW2-1:1

Basic information

LNCipedia transcript ID: lnc-ZCWPW2-1:1 
LNCipedia gene ID: lnc-ZCWPW2-1
Location (hg19): chr3:28632042-28647684
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 509 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005508; NONHSAT088795
Alternative gene names: XLOC_002605; linc-RBMS3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.5209 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZCWPW2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZCWPW2-1:1
3.1 lnc-ZCWPW2-1:1
4.0 lnc-ZCWPW2-1:1
4.1 lnc-ZCWPW2-1:1
5.0 lnc-ZCWPW2-1:1
5.1 lnc-CMC1-1:8
5.2 lnc-ZCWPW2-1:1