Transcript: lnc-ZDHHC6-1:4

Basic information

LNCipedia transcript ID: lnc-ZDHHC6-1:4 
LNCipedia gene ID: lnc-ZDHHC6-1
Location (hg19): chr10:114165977-114169248
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 752 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT016399; ENST00000449782.2
Alternative gene names: ENSG00000232934.3; RP11-324O2.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.2609 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC6-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZDHHC6-1:4
4.0 lnc-ZDHHC6-1:4
4.1 lnc-ZDHHC6-1:4
5.0 lnc-ZDHHC6-1:4
5.1 lnc-BBIP1-21:6
5.2 lnc-ZDHHC6-1:4