Transcript: lnc-ZDHHC8-1:2

Basic information

LNCipedia transcript ID: lnc-ZDHHC8-1:2 
LNCipedia gene ID: lnc-ZDHHC8-1
Location (hg19): chr22:20186296-20192440
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2183 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029362; NONHSAT083492
Alternative gene names: XLOC_014156; linc-ZNF74-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.8883 non-coding 
CPAT coding probability 5.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC8-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC007663.1-1:1
3.1 lnc-AC007663.1-1:1
4.0 lnc-AC007663.1-1:1
4.1 lnc-AC007663.1-1:1
5.0 lnc-AC007663.1-1:1
5.1 lnc-SERPIND1-8:1
5.2 lnc-ZDHHC8-1:2