Transcript: lnc-ZEB1-12:5

Basic information

LNCipedia transcript ID: lnc-ZEB1-12:5 
LNCipedia gene ID: lnc-ZEB1-12
Location (hg19): chr10:32217858-32221055
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2070 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000111224.1|MICT00000039480.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.2617 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB1-12:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZEB1-7:6
5.0 lnc-ZEB1-7:6
5.1 lnc-NPY4R2-182:5
5.2 lnc-ZEB1-12:5