Transcript: lnc-ZEB1-4:3

Basic information

LNCipedia transcript ID: lnc-ZEB1-4:3 
LNCipedia gene ID: lnc-ZEB1-4
RefSeq ID: NR_134478
Location (hg19): chr10:31476812-31550481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 930 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134478.1
Alternative gene names: LOC101929352


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.1129 non-coding 
CPAT coding probability 10.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NPY4R2-191:2
5.1 lnc-NPY4R2-191:2
5.2 lnc-ZEB1-4:3