Transcript: lnc-ZEB2-1:15

Basic information

LNCipedia transcript ID: lnc-ZEB2-1:15 
LNCipedia gene ID: lnc-ZEB2-1
RefSeq ID: NR_136320
Location (hg19): chr2:145281111-145282011
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 343 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136320.1
Alternative gene names: LOC105373656


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -276.0376 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB2-1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MMADHC-68:5
5.1 lnc-MMADHC-68:5
5.2 lnc-ZEB2-1:15