Transcript: lnc-ZEB2-6:1

Basic information

LNCipedia transcript ID: lnc-ZEB2-6:1 
LNCipedia gene ID: lnc-ZEB2-6
Location (hg19): chr2:144997572-144998619
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 376 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1961_chr2:144997571-144998619_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.5469 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZEB2-6:1
4.0 lnc-ZEB2-6:1
4.1 lnc-ZEB2-6:1
5.0 lnc-ZEB2-6:1
5.1 lnc-MMADHC-71:1
5.2 lnc-ZEB2-6:1