Transcript: lnc-ZFAND4-1:1

Basic information

LNCipedia transcript ID: lnc-ZFAND4-1:1 
LNCipedia gene ID: lnc-ZFAND4-1
Location (hg19): chr10:46088878-46090046
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 559 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000451376.1; RP11-358L16.2-001; OTTHUMT00000047788.1; NONHSAT013108
Alternative gene names: ENSG00000242639.1; RP11-358L16.2; OTTHUMG00000018084.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -236.6459 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFAND4-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFAND4-1:1
4.0 lnc-ZFAND4-1:1
4.1 lnc-ZFAND4-1:1
5.0 lnc-ZFAND4-1:1
5.1 lnc-LRRC18-66:1
5.2 lnc-ZFAND4-1:1