Transcript: lnc-ZFAT-5:1

Basic information

LNCipedia transcript ID: lnc-ZFAT-5:1 
LNCipedia gene ID: lnc-ZFAT-5
Location (hg19): chr8:137249531-137255634
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015181; NONHSAT129304
Alternative gene names: XLOC_007235; linc-ZFAT-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.6992 non-coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFAT-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZFAT-3:1
3.1 lnc-ZFAT-5:1
4.0 lnc-ZFAT-5:1
4.1 lnc-ZFAT-5:1
5.0 lnc-ZFAT-5:1
5.1 lnc-SLURP2-58:1
5.2 lnc-ZFAT-5:1