Transcript: lnc-ZFHX4-3:5

Basic information

LNCipedia transcript ID: lnc-ZFHX4-3:5 
LNCipedia gene ID: lnc-ZFHX4-3
Location (hg19): chr8:78376247-78388737
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 276 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014774; NONHSAT127358
Alternative gene names: XLOC_006853; linc-PKIA-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.6484 non-coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX4-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZFHX4-3:5
3.1 lnc-ZFHX4-3:5
4.0 lnc-ZFHX4-3:5
4.1 lnc-ZFHX4-3:5
5.0 lnc-ZFHX4-3:5
5.1 lnc-SULF1-67:12
5.2 lnc-ZFHX4-3:5