Transcript: lnc-ZFHX4-3:6

Basic information

LNCipedia transcript ID: lnc-ZFHX4-3:6 
LNCipedia gene ID: lnc-ZFHX4-3
Location (hg19): chr8:78290937-78518940
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1211 bp
Exons: 11
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT127353; FPKM1_group_31578_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.26 non-coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX4-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFHX4-3:6
4.0 lnc-ZFHX4-3:6
4.1 lnc-ZFHX4-3:6
5.0 lnc-ZFHX4-3:6
5.1 lnc-SULF1-67:1
5.2 lnc-ZFHX4-3:6