Transcript: lnc-ZFP57-16:1

Basic information

LNCipedia transcript ID: lnc-ZFP57-16:1 
LNCipedia gene ID: lnc-ZFP57-16
RefSeq ID: NR_002139
Location (hg19): chr6:29758808-29760850
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2043 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108552; NR_002139; NR_002139.2
Alternative gene names: HCGIV-10; HCGIV.9; HCG4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.4477 non-coding 
CPAT coding probability 54.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZFP57-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP57-14:1
4.0 HCG4:1
4.1 HCG4:1
5.0 HCG4:1
5.1 lnc-SFTA2-33:1
5.2 lnc-ZFP57-16:1