Transcript: lnc-ZFP57-16:3

Basic information

LNCipedia transcript ID: lnc-ZFP57-16:3 
LNCipedia gene ID: lnc-ZFP57-16
Location (hg19): chr6:29759530-29760527
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 998 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT108553
Alternative gene names: HCGIV-10; HCGIV.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.7324 non-coding 
CPAT coding probability 55.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZFP57-16:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP57-14:2
4.0 HCG4:3
4.1 HCG4:3
5.0 HCG4:3
5.1 lnc-SFTA2-33:3
5.2 lnc-ZFP57-16:3