Transcript: lnc-ZHX2-6:3

Basic information

LNCipedia transcript ID: lnc-ZHX2-6:3 
LNCipedia gene ID: lnc-ZHX2-6
Location (hg19): chr8:122709844-123006159
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014845; NONHSAT128474
Alternative gene names: XLOC_006911; linc-ZHX2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.3244 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZHX2-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-785H20.1.1-1:3
3.1 lnc-RP11-785H20.1.1-1:3
4.0 lnc-RP11-785H20.1.1-1:3
4.1 lnc-RP11-785H20.1.1-1:3
5.0 lnc-RP11-785H20.1.1-1:3
5.1 lnc-NOV-16:3
5.2 lnc-ZHX2-6:3