Transcript: lnc-ZKSCAN2-5:1

Basic information

LNCipedia transcript ID: lnc-ZKSCAN2-5:1 
LNCipedia gene ID: lnc-ZKSCAN2-5
Location (hg19): chr16:24960449-24966008
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 555 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT141181
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1165.7716 coding 
CPAT coding probability 20.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZKSCAN2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZKSCAN2-5:1
4.0 lnc-ZKSCAN2-5:1
4.1 lnc-ZKSCAN2-5:1
5.0 lnc-ZKSCAN2-5:1
5.1 lnc-SULT1A2-135:1
5.2 lnc-ZKSCAN2-5:1