Transcript: lnc-ZMYND19-17:1

Basic information

LNCipedia transcript ID: lnc-ZMYND19-17:1 
LNCipedia gene ID: lnc-ZMYND19-17
RefSeq ID: NR_132977
Location (hg19): chr9:140838082-140841512
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1951 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132977.1
Alternative gene names: LOC105376331


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.8276 non-coding 
CPAT coding probability 11.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZMYND19-17:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM166A-17:1
5.1 lnc-FAM166A-17:1
5.2 lnc-ZMYND19-17:1