Transcript: lnc-ZNF131-1:28

Basic information

LNCipedia transcript ID: lnc-ZNF131-1:28 
LNCipedia gene ID: lnc-ZNF131-1
Ensembl Gene ID: ENSG00000272144
Ensembl Transcript ID: ENST00000607250
Location (hg19): chr5:43061497-43062543
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1047 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607250.1
Alternative gene names: ENSG00000272144.1; CTD-2035E11.5; AC025171.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3594 non-coding 
CPAT coding probability 10.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF131-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF131-5:2
4.0 lnc-ZNF131-5:2
4.1 lnc-ZNF131-1:28
5.0 lnc-ZNF131-1:28
5.1 lnc-CARD6-41:28
5.2 lnc-ZNF131-1:28