Transcript: lnc-ZNF131-1:6

Basic information

LNCipedia transcript ID: lnc-ZNF131-1:6 
LNCipedia gene ID: lnc-ZNF131-1
RefSeq ID: NR_015447
Location (hg19): chr5:43042236-43045370
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2260 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_015447; NR_015447.1
Alternative gene names: LOC153684


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 86.3412 coding 
CPAT coding probability 50.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF131-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF131-1:6
4.0 lnc-ZNF131-1:6
4.1 lnc-ZNF131-1:6
5.0 lnc-ZNF131-1:6
5.1 lnc-CARD6-41:18
5.2 lnc-ZNF131-1:6