Transcript: lnc-ZNF146-1:8

Basic information

LNCipedia transcript ID: lnc-ZNF146-1:8 
LNCipedia gene ID: lnc-ZNF146-1
Ensembl Gene ID: ENSG00000267053
Ensembl Transcript ID: ENST00000586345
Location (hg19): chr19:36795482-36802694
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 797 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065972; ENST00000586345.1; ENST00000586345.5
Alternative gene names: ENSG00000267053.2; CTD-3162L10.1; ENSG00000267053.6; AC012617.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.058 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF146-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF146-1:8
4.0 lnc-ZNF146-1:8
4.1 lnc-ZNF146-1:8
5.0 lnc-ZNF146-1:8
5.1 lnc-ZNF345-19:1
5.2 lnc-ZNF146-1:8