Transcript: lnc-ZNF154-1:2

Basic information

LNCipedia transcript ID: lnc-ZNF154-1:2 
LNCipedia gene ID: lnc-ZNF154-1
Location (hg19): chr19:58208735-58220536
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5687 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000317656.4; ZNF154-002; OTTHUMT00000277102.1
Alternative gene names: ENSG00000249233.2; ZNF154; OTTHUMG00000140375.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 290.9862 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF154-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF154-1:2
4.0 lnc-ZNF154-1:2
4.1 lnc-ZNF154-1:2
5.0 lnc-ZNF154-1:2
5.1 lnc-ZNF772-11:2
5.2 lnc-ZNF154-1:2