Transcript: lnc-ZNF275-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF275-4:1 
LNCipedia gene ID: lnc-ZNF275-4
Location (hg19): chrX:152689210-152691934
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2725 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000569962.1; U82695.10-001; OTTHUMT00000430278.1; NONHSAT139073
Alternative gene names: ENSG00000259886.1; U82695.10; OTTHUMG00000175500.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.807 non-coding 
CPAT coding probability 13.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF275-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U82695.9.1-1:1
4.0 lnc-U82695.9.1-1:1
4.1 lnc-U82695.9.1-1:1
5.0 lnc-U82695.9.1-1:1
5.1 lnc-MAGEA11-44:1
5.2 lnc-ZNF275-4:1