Transcript: lnc-ZNF280B-6:4

Basic information

LNCipedia transcript ID: lnc-ZNF280B-6:4 
LNCipedia gene ID: lnc-ZNF280B-6
Location (hg19): chr22:23154489-23241834
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 327 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000418352; NONHSAT083823
Alternative gene names: ENSG00000240269; D87024.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.6172 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF280B-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RTDR1-1:2
3.1 lnc-RTDR1-1:2
4.0 lnc-POM121L1P-6:4
4.1 lnc-POM121L1P-6:4
5.0 lnc-POM121L1P-6:4
5.1 lnc-SCARF2-56:4
5.2 lnc-ZNF280B-6:4