Transcript: lnc-ZNF286A-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF286A-4:1 
LNCipedia gene ID: lnc-ZNF286A-4
Ensembl Gene ID: ENSG00000265445
Ensembl Transcript ID: ENST00000579159
Location (hg19): chr17:15164332-15169024
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 373 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579159.1; RP11-849N15.1-001; OTTHUMT00000442217.1; NONHSAT145797
Alternative gene names: ENSG00000265445.1; RP11-849N15.1; OTTHUMG00000178498.1; AC005703.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -380.5616 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF286A-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF286A-4:1
4.0 lnc-ZNF286A-4:1
4.1 lnc-ZNF286A-4:1
5.0 lnc-ZNF286A-4:1
5.1 lnc-GLP2R-53:2
5.2 lnc-ZNF286A-4:1