Transcript: lnc-ZNF397-3:2

Basic information

LNCipedia transcript ID: lnc-ZNF397-3:2 
LNCipedia gene ID: lnc-ZNF397-3
Ensembl Gene ID: ENSG00000274184
Ensembl Transcript ID: ENST00000618230
Location (hg19): chr18:32848182-32850202
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2021 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000618230.1
Alternative gene names: ENSG00000274184.1; RP11-158H5.8; AC011815.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.0522 non-coding 
CPAT coding probability 5.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF397-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF397-3:2
4.1 lnc-ZNF397-3:2
5.0 lnc-ZNF397-3:2
5.1 lnc-RIOK3-173:1
5.2 lnc-ZNF397-3:2