Transcript: lnc-ZNF397-4:4

Basic information

LNCipedia transcript ID: lnc-ZNF397-4:4 
LNCipedia gene ID: lnc-ZNF397-4
Location (hg19): chr18:32890135-32893339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3205 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT058922; FPKM1_group_13825_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.3893 non-coding 
CPAT coding probability 6.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF397-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF397-4:4
4.0 lnc-ZNF397-4:4
4.1 lnc-ZNF397-4:4
5.0 lnc-ZNF397-4:4
5.1 lnc-RIOK3-175:5
5.2 lnc-ZNF397-4:4