Transcript: lnc-ZNF397-6:1

Basic information

LNCipedia transcript ID: lnc-ZNF397-6:1 
LNCipedia gene ID: lnc-ZNF397-6
Ensembl Gene ID: ENSG00000274918
Ensembl Transcript ID: ENST00000613153
Location (hg19): chr18:32897360-32897812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 453 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000613153.1
Alternative gene names: ENSG00000274918.1; RP11-54G14.1; AC116447.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.4616 non-coding 
CPAT coding probability 1.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF397-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF397-6:1
4.1 lnc-ZNF397-6:1
5.0 lnc-ZNF397-6:1
5.1 lnc-RIOK3-174:1
5.2 lnc-ZNF397-6:1