Transcript: lnc-ZNF442-1:2

Basic information

LNCipedia transcript ID: lnc-ZNF442-1:2 
LNCipedia gene ID: lnc-ZNF442-1
Location (hg19): chr19:12456763-12458752
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1990 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT061244; ENST00000563695.2
Alternative gene names: ENSG00000261280.2; CTD-3105H18.13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0972 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF442-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF442-1:2
4.0 lnc-ZNF442-1:2
4.1 lnc-ZNF442-1:2
5.0 lnc-ZNF442-1:2
5.1 lnc-ZNF443-1:2
5.2 lnc-ZNF442-1:2