Transcript: lnc-ZNF445-14:3

Basic information

LNCipedia transcript ID: lnc-ZNF445-14:3 
LNCipedia gene ID: lnc-ZNF445-14
Location (hg19): chr3:44462619-44465499
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 732 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00005769; ENST00000416124; ENST00000416124.1; RP11-101C21.1-001; OTTHUMT00000343325.1
Alternative gene names: XLOC_003104; linc-ANO10-2; ENSG00000225873; RP11-101C21.1; ENSG00000225873.1; OTTHUMG00000156179.1; LINC00694;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -169.684 non-coding 
CPAT coding probability 31.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF445-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF445-1:1
3.1 lnc-ZNF445-1:1
4.0 LINC00694:2
4.1 LINC00694:2
5.0 LINC00694:2
5.1 lnc-HIGD1A-14:3
5.2 lnc-ZNF445-14:3