Transcript: lnc-ZNF460-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF460-2:1 
LNCipedia gene ID: lnc-ZNF460-2
Ensembl Gene ID: ENSG00000268205
Ensembl Transcript ID: ENST00000593427
Location (hg19): chr19:57815673-57819930
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4258 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068223; ENST00000593427.1
Alternative gene names: ENSG00000268205.1; CTC-444N24.11; AC005261.2; AC005261.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.069 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF460-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF460-2:1
4.0 lnc-ZNF460-2:1
4.1 lnc-ZNF460-2:1
5.0 lnc-ZNF460-2:1
5.1 lnc-ZNF587B-39:1
5.2 lnc-ZNF460-2:1