Transcript: lnc-ZNF487-4:2

Basic information

LNCipedia transcript ID: lnc-ZNF487-4:2 
LNCipedia gene ID: lnc-ZNF487-4
Location (hg19): chr10:43904742-43907832
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3091 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000113439.1|HBMT00000142693.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.4387 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF487-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF487P-4:3
5.0 lnc-ZNF487P-4:3
5.1 lnc-NPY4R2-81:2
5.2 lnc-ZNF487-4:2