Transcript: lnc-ZNF536-55:1

Basic information

LNCipedia transcript ID: lnc-ZNF536-55:1 
LNCipedia gene ID: lnc-ZNF536-55
Ensembl Gene ID: ENSG00000284430
Ensembl Transcript ID: ENST00000638312
Location (hg19): chr19:31591210-31638887
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5059 bp
Exons: 6
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000638312.1
Alternative gene names: ENSG00000284430.1; AC020912.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.7804 non-coding 
CPAT coding probability 20.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF536-55:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GPI-55:1
5.1 lnc-GPI-55:1
5.2 lnc-ZNF536-55:1