Transcript: lnc-ZNF573-1:6

Basic information

LNCipedia transcript ID: lnc-ZNF573-1:6 
LNCipedia gene ID: lnc-ZNF573-1
Location (hg19): chr19:38324103-38344187
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT066174; ENST00000587395.1; ENST00000587395.5
Alternative gene names: ENSG00000225868.2; AC016582.2; ENSG00000225868.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.2882 non-coding 
CPAT coding probability 17.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF573-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF573-1:6
4.0 lnc-ZNF573-1:6
4.1 lnc-ZNF573-1:6
5.0 lnc-ZNF573-1:6
5.1 lnc-ZFP30-8:6
5.2 lnc-ZNF573-1:6