Transcript: lnc-ZNF608-15:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-15:1 
LNCipedia gene ID: lnc-ZNF608-15
Location (hg19): chr5:124232481-124239722
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1114 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3006_chr5:124232480-124239722_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.2949 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF608-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF608-15:1
4.0 lnc-ZNF608-15:1
4.1 lnc-ZNF608-15:1
5.0 lnc-ZNF608-15:1
5.1 lnc-LOX-38:1
5.2 lnc-ZNF608-15:1