Transcript: lnc-ZNF608-16:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-16:1 
LNCipedia gene ID: lnc-ZNF608-16
Location (hg19): chr5:124357273-124359679
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 299 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3008_chr5:124357272-124359679_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -233.1303 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF608-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF608-16:1
4.0 lnc-ZNF608-16:1
4.1 lnc-ZNF608-16:1
5.0 lnc-ZNF608-16:1
5.1 lnc-LOX-42:1
5.2 lnc-ZNF608-16:1