Transcript: lnc-ZNF664-2:20

Basic information

LNCipedia transcript ID: lnc-ZNF664-2:20 
LNCipedia gene ID: lnc-ZNF664-2
Location (hg19): chr12:124634216-124725562
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 431 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020612; NONHSAT031648
Alternative gene names: XLOC_009927; linc-FAM101A-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.5574 non-coding 
CPAT coding probability 3.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF664-2:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM101A-2:2
3.1 lnc-FAM101A-2:4
4.0 lnc-ZNF664-2:20
4.1 lnc-ZNF664-2:20
5.0 lnc-ZNF664-2:20
5.1 lnc-ZNF664-2:20
5.2 lnc-ZNF664-2:20